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Cluster: HRGMv2_1528_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1528_58 HRGMv2_1528_58_2 1712 4480 - 3.A.3.4.1
STP HRGMv2_1528_58 HRGMv2_1528_58_3 4922 5602 + Pribosyltran
TF HRGMv2_1528_58 HRGMv2_1528_58_4 6045 6899 - HTH_6
CAZyme HRGMv2_1528_58 HRGMv2_1528_58_5 6942 9542 - GH106
TF HRGMv2_1528_58 HRGMv2_1528_58_6 9659 10666 + HTH_AraC
CAZyme HRGMv2_1528_58 HRGMv2_1528_58_7 10839 12287 + GH1
TC HRGMv2_1528_58 HRGMv2_1528_58_8 12439 12975 + 4.A.1.2.6
Gene ID: HRGMv2_1528_58_2
Type: TC
Location: 1712 - 4480 (-)
Gene ID: HRGMv2_1528_58_3
Type: STP
Location: 4922 - 5602 (+)
Gene ID: HRGMv2_1528_58_4
Type: TF
Location: 6045 - 6899 (-)
Gene ID: HRGMv2_1528_58_5
Type: CAZyme
Location: 6942 - 9542 (-)
Gene ID: HRGMv2_1528_58_6
Type: TF
Location: 9659 - 10666 (+)
Gene ID: HRGMv2_1528_58_7
Type: CAZyme
Location: 10839 - 12287 (+)
Gene ID: HRGMv2_1528_58_8
Type: TC
Location: 12439 - 12975 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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