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Cluster: HRGMv2_1528_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1528_32 HRGMv2_1528_32_3 3040 4545 + GH77
CAZyme HRGMv2_1528_32 HRGMv2_1528_32_4 4674 6941 + GT35
TC HRGMv2_1528_32 HRGMv2_1528_32_5 7561 8760 - 3.A.1.1.22
TC HRGMv2_1528_32 HRGMv2_1528_32_6 8829 9668 - 3.A.1.1.45
TC HRGMv2_1528_32 HRGMv2_1528_32_7 9668 10522 - 3.A.1.1.45
TC HRGMv2_1528_32 HRGMv2_1528_32_8 10610 11926 - 3.A.1.1.45
TF HRGMv2_1528_32 HRGMv2_1528_32_9 12233 12952 - GntR
NULL(UNKNOWN) HRGMv2_1528_32 HRGMv2_1528_32_10 13036 13155 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1528_32 HRGMv2_1528_32_11 13177 15627 + 4.A.1.1.8
Gene ID: HRGMv2_1528_32_3
Type: CAZyme
Location: 3040 - 4545 (+)
Gene ID: HRGMv2_1528_32_4
Type: CAZyme
Location: 4674 - 6941 (+)
Gene ID: HRGMv2_1528_32_5
Type: TC
Location: 7561 - 8760 (-)
Gene ID: HRGMv2_1528_32_6
Type: TC
Location: 8829 - 9668 (-)
Gene ID: HRGMv2_1528_32_7
Type: TC
Location: 9668 - 10522 (-)
Gene ID: HRGMv2_1528_32_8
Type: TC
Location: 10610 - 11926 (-)
Gene ID: HRGMv2_1528_32_9
Type: TF
Location: 12233 - 12952 (-)
Gene ID: HRGMv2_1528_32_10
Type:
Location: 13036 - 13155 (-)
Gene ID: HRGMv2_1528_32_11
Type: TC
Location: 13177 - 15627 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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