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Cluster: HRGMv2_1526_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1526_5 HRGMv2_1526_5_54 48052 49785 - GH13_30
STP HRGMv2_1526_5 HRGMv2_1526_5_55 50530 51276 - STAS
STP HRGMv2_1526_5 HRGMv2_1526_5_56 51355 53700 - GAF | SpoIIE
TC HRGMv2_1526_5 HRGMv2_1526_5_57 54441 55469 - 3.A.1.5.36
TC HRGMv2_1526_5 HRGMv2_1526_5_58 55470 56561 - 3.A.1.5.34
TC HRGMv2_1526_5 HRGMv2_1526_5_59 56564 57499 - 3.A.1.5.11
TC HRGMv2_1526_5 HRGMv2_1526_5_60 57514 58551 - 3.A.1.5.37
TC HRGMv2_1526_5 HRGMv2_1526_5_61 58708 60384 - 3.A.1.5.35
Gene ID: HRGMv2_1526_5_54
Type: CAZyme
Location: 48052 - 49785 (-)
Gene ID: HRGMv2_1526_5_55
Type: STP
Location: 50530 - 51276 (-)
Gene ID: HRGMv2_1526_5_56
Type: STP
Location: 51355 - 53700 (-)
Gene ID: HRGMv2_1526_5_57
Type: TC
Location: 54441 - 55469 (-)
Gene ID: HRGMv2_1526_5_58
Type: TC
Location: 55470 - 56561 (-)
Gene ID: HRGMv2_1526_5_59
Type: TC
Location: 56564 - 57499 (-)
Gene ID: HRGMv2_1526_5_60
Type: TC
Location: 57514 - 58551 (-)
Gene ID: HRGMv2_1526_5_61
Type: TC
Location: 58708 - 60384 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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