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Cluster: HRGMv2_1526_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1526_4 HRGMv2_1526_4_67 68704 70125 - GH1
TC HRGMv2_1526_4 HRGMv2_1526_4_68 70202 71962 - 4.A.3.1.1
TF HRGMv2_1526_4 HRGMv2_1526_4_69 72238 73248 + LacI
CAZyme HRGMv2_1526_4 HRGMv2_1526_4_70 73744 75183 - GH1
TC HRGMv2_1526_4 HRGMv2_1526_4_71 75380 77155 - 4.A.3.1.1
TF HRGMv2_1526_4 HRGMv2_1526_4_72 77512 78516 + LacI
TC HRGMv2_1526_4 HRGMv2_1526_4_73 78730 79068 + 4.A.3.1.2
Gene ID: HRGMv2_1526_4_67
Type: CAZyme
Location: 68704 - 70125 (-)
Gene ID: HRGMv2_1526_4_68
Type: TC
Location: 70202 - 71962 (-)
Gene ID: HRGMv2_1526_4_69
Type: TF
Location: 72238 - 73248 (+)
Gene ID: HRGMv2_1526_4_70
Type: CAZyme
Location: 73744 - 75183 (-)
Gene ID: HRGMv2_1526_4_71
Type: TC
Location: 75380 - 77155 (-)
Gene ID: HRGMv2_1526_4_72
Type: TF
Location: 77512 - 78516 (+)
Gene ID: HRGMv2_1526_4_73
Type: TC
Location: 78730 - 79068 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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