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Cluster: HRGMv2_1526_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1526_4 HRGMv2_1526_4_47 50651 51094 + 4.A.6.1.16
pfam HRGMv2_1526_4 HRGMv2_1526_4_48 51094 51375 + YajC
TC HRGMv2_1526_4 HRGMv2_1526_4_49 51412 51894 + 4.A.6.1.4
TC HRGMv2_1526_4 HRGMv2_1526_4_50 51985 52785 + 4.A.6.1.4
TC HRGMv2_1526_4 HRGMv2_1526_4_51 52775 53857 + 4.A.6.1.4
TF HRGMv2_1526_4 HRGMv2_1526_4_52 54042 54773 + GntR
STP HRGMv2_1526_4 HRGMv2_1526_4_53 54888 56054 + SIS | SIS
CAZyme HRGMv2_1526_4 HRGMv2_1526_4_54 56172 57341 + CE9
Gene ID: HRGMv2_1526_4_47
Type: TC
Location: 50651 - 51094 (+)
Gene ID: HRGMv2_1526_4_48
Type: pfam
Location: 51094 - 51375 (+)
Gene ID: HRGMv2_1526_4_49
Type: TC
Location: 51412 - 51894 (+)
Gene ID: HRGMv2_1526_4_50
Type: TC
Location: 51985 - 52785 (+)
Gene ID: HRGMv2_1526_4_51
Type: TC
Location: 52775 - 53857 (+)
Gene ID: HRGMv2_1526_4_52
Type: TF
Location: 54042 - 54773 (+)
Gene ID: HRGMv2_1526_4_53
Type: STP
Location: 54888 - 56054 (+)
Gene ID: HRGMv2_1526_4_54
Type: CAZyme
Location: 56172 - 57341 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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