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Cluster: HRGMv2_1526_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1526_2 HRGMv2_1526_2_129 129780 132119 - 3.A.3.5.15
STP HRGMv2_1526_2 HRGMv2_1526_2_130 132592 134676 - Pkinase
STP HRGMv2_1526_2 HRGMv2_1526_2_131 134846 135808 - FHA
TC HRGMv2_1526_2 HRGMv2_1526_2_132 136474 138720 + 1.I.1.1.3
STP HRGMv2_1526_2 HRGMv2_1526_2_133 139339 140100 + Fer4
TC HRGMv2_1526_2 HRGMv2_1526_2_134 140381 140893 + 4.A.1.2.5
pfam HRGMv2_1526_2 HRGMv2_1526_2_135 140900 141766 + PRD | PRD | CAT_RBD
TC HRGMv2_1526_2 HRGMv2_1526_2_136 141866 143482 + 4.A.1.1.3
CAZyme HRGMv2_1526_2 HRGMv2_1526_2_137 143486 144868 + GH4
Gene ID: HRGMv2_1526_2_129
Type: TC
Location: 129780 - 132119 (-)
Gene ID: HRGMv2_1526_2_130
Type: STP
Location: 132592 - 134676 (-)
Gene ID: HRGMv2_1526_2_131
Type: STP
Location: 134846 - 135808 (-)
Gene ID: HRGMv2_1526_2_132
Type: TC
Location: 136474 - 138720 (+)
Gene ID: HRGMv2_1526_2_133
Type: STP
Location: 139339 - 140100 (+)
Gene ID: HRGMv2_1526_2_134
Type: TC
Location: 140381 - 140893 (+)
Gene ID: HRGMv2_1526_2_135
Type: pfam
Location: 140900 - 141766 (+)
Gene ID: HRGMv2_1526_2_136
Type: TC
Location: 141866 - 143482 (+)
Gene ID: HRGMv2_1526_2_137
Type: CAZyme
Location: 143486 - 144868 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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