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Cluster: HRGMv2_1526_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1526_31 HRGMv2_1526_31_11 15102 17552 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1526_31 HRGMv2_1526_31_12 17574 17693 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1526_31 HRGMv2_1526_31_13 17777 18496 + GntR
TC HRGMv2_1526_31 HRGMv2_1526_31_14 18803 20119 + 3.A.1.1.45
TC HRGMv2_1526_31 HRGMv2_1526_31_15 20207 21061 + 3.A.1.1.45
TC HRGMv2_1526_31 HRGMv2_1526_31_16 21061 21900 + 3.A.1.1.45
TC HRGMv2_1526_31 HRGMv2_1526_31_17 21969 23168 + 3.A.1.1.22
CAZyme HRGMv2_1526_31 HRGMv2_1526_31_18 23624 25891 - GT35
CAZyme HRGMv2_1526_31 HRGMv2_1526_31_19 26021 27526 - GH77
Gene ID: HRGMv2_1526_31_11
Type: TC
Location: 15102 - 17552 (-)
Gene ID: HRGMv2_1526_31_12
Type:
Location: 17574 - 17693 (+)
Gene ID: HRGMv2_1526_31_13
Type: TF
Location: 17777 - 18496 (+)
Gene ID: HRGMv2_1526_31_14
Type: TC
Location: 18803 - 20119 (+)
Gene ID: HRGMv2_1526_31_15
Type: TC
Location: 20207 - 21061 (+)
Gene ID: HRGMv2_1526_31_16
Type: TC
Location: 21061 - 21900 (+)
Gene ID: HRGMv2_1526_31_17
Type: TC
Location: 21969 - 23168 (+)
Gene ID: HRGMv2_1526_31_18
Type: CAZyme
Location: 23624 - 25891 (-)
Gene ID: HRGMv2_1526_31_19
Type: CAZyme
Location: 26021 - 27526 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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