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Cluster: HRGMv2_1526_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1526_5 HRGMv2_1526_5_73 71648 72532 - CE7
TC HRGMv2_1526_5 HRGMv2_1526_5_74 72706 73533 - 3.A.1.5.27
TC HRGMv2_1526_5 HRGMv2_1526_5_75 73534 75549 - 3.A.1.5.25
TC HRGMv2_1526_5 HRGMv2_1526_5_76 75553 76509 - 3.A.1.5.38
TC HRGMv2_1526_5 HRGMv2_1526_5_77 76667 78280 - 3.A.1.5.27
pfam HRGMv2_1526_5 HRGMv2_1526_5_78 78646 80586 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1526_5 HRGMv2_1526_5_79 80593 82275 - 2.A.66.4.4
Gene ID: HRGMv2_1526_5_73
Type: CAZyme
Location: 71648 - 72532 (-)
Gene ID: HRGMv2_1526_5_74
Type: TC
Location: 72706 - 73533 (-)
Gene ID: HRGMv2_1526_5_75
Type: TC
Location: 73534 - 75549 (-)
Gene ID: HRGMv2_1526_5_76
Type: TC
Location: 75553 - 76509 (-)
Gene ID: HRGMv2_1526_5_77
Type: TC
Location: 76667 - 78280 (-)
Gene ID: HRGMv2_1526_5_78
Type: pfam
Location: 78646 - 80586 (-)
Gene ID: HRGMv2_1526_5_79
Type: TC
Location: 80593 - 82275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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