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Cluster: HRGMv2_1525_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1525_26 HRGMv2_1525_26_11 14975 17425 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1525_26 HRGMv2_1525_26_12 17447 17566 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1525_26 HRGMv2_1525_26_13 17650 18369 + GntR
TC HRGMv2_1525_26 HRGMv2_1525_26_14 18676 19992 + 3.A.1.1.45
TC HRGMv2_1525_26 HRGMv2_1525_26_15 20080 20934 + 3.A.1.1.45
TC HRGMv2_1525_26 HRGMv2_1525_26_16 20934 21773 + 3.A.1.1.45
TC HRGMv2_1525_26 HRGMv2_1525_26_17 21842 23041 + 3.A.1.1.22
CAZyme HRGMv2_1525_26 HRGMv2_1525_26_18 23499 25766 - GT35
CAZyme HRGMv2_1525_26 HRGMv2_1525_26_19 25896 27401 - GH77
Gene ID: HRGMv2_1525_26_11
Type: TC
Location: 14975 - 17425 (-)
Gene ID: HRGMv2_1525_26_12
Type:
Location: 17447 - 17566 (+)
Gene ID: HRGMv2_1525_26_13
Type: TF
Location: 17650 - 18369 (+)
Gene ID: HRGMv2_1525_26_14
Type: TC
Location: 18676 - 19992 (+)
Gene ID: HRGMv2_1525_26_15
Type: TC
Location: 20080 - 20934 (+)
Gene ID: HRGMv2_1525_26_16
Type: TC
Location: 20934 - 21773 (+)
Gene ID: HRGMv2_1525_26_17
Type: TC
Location: 21842 - 23041 (+)
Gene ID: HRGMv2_1525_26_18
Type: CAZyme
Location: 23499 - 25766 (-)
Gene ID: HRGMv2_1525_26_19
Type: CAZyme
Location: 25896 - 27401 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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