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Cluster: HRGMv2_1525_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1525_22 HRGMv2_1525_22_8 10797 12479 + 2.A.66.4.4
pfam HRGMv2_1525_22 HRGMv2_1525_22_9 12486 14426 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1525_22 HRGMv2_1525_22_10 14792 16405 + 3.A.1.5.27
TC HRGMv2_1525_22 HRGMv2_1525_22_11 16563 17519 + 3.A.1.5.38
TC HRGMv2_1525_22 HRGMv2_1525_22_12 17523 19538 + 3.A.1.5.25
TC HRGMv2_1525_22 HRGMv2_1525_22_13 19539 20366 + 3.A.1.5.27
CAZyme HRGMv2_1525_22 HRGMv2_1525_22_14 20540 21424 + CE7
Gene ID: HRGMv2_1525_22_8
Type: TC
Location: 10797 - 12479 (+)
Gene ID: HRGMv2_1525_22_9
Type: pfam
Location: 12486 - 14426 (+)
Gene ID: HRGMv2_1525_22_10
Type: TC
Location: 14792 - 16405 (+)
Gene ID: HRGMv2_1525_22_11
Type: TC
Location: 16563 - 17519 (+)
Gene ID: HRGMv2_1525_22_12
Type: TC
Location: 17523 - 19538 (+)
Gene ID: HRGMv2_1525_22_13
Type: TC
Location: 19539 - 20366 (+)
Gene ID: HRGMv2_1525_22_14
Type: CAZyme
Location: 20540 - 21424 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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