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Cluster: HRGMv2_1524_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1524_12 HRGMv2_1524_12_36 41770 44112 - 3.A.3.5.15
STP HRGMv2_1524_12 HRGMv2_1524_12_37 44685 46769 - Pkinase
STP HRGMv2_1524_12 HRGMv2_1524_12_38 46940 47902 - FHA
TC HRGMv2_1524_12 HRGMv2_1524_12_39 48482 50731 + 1.I.1.1.3
TC HRGMv2_1524_12 HRGMv2_1524_12_40 51095 51607 + 4.A.1.2.5
pfam HRGMv2_1524_12 HRGMv2_1524_12_41 51614 52480 + PRD | PRD | CAT_RBD
TC HRGMv2_1524_12 HRGMv2_1524_12_42 52580 54196 + 4.A.1.1.3
CAZyme HRGMv2_1524_12 HRGMv2_1524_12_43 54200 55582 + GH4
STP HRGMv2_1524_12 HRGMv2_1524_12_44 56018 57850 + Pyr_redox_2
TC HRGMv2_1524_12 HRGMv2_1524_12_45 57844 59655 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1524_12 HRGMv2_1524_12_46 59658 60713 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1524_12 HRGMv2_1524_12_47 60717 62093 + 3.A.1.17.10
Gene ID: HRGMv2_1524_12_36
Type: TC
Location: 41770 - 44112 (-)
Gene ID: HRGMv2_1524_12_37
Type: STP
Location: 44685 - 46769 (-)
Gene ID: HRGMv2_1524_12_38
Type: STP
Location: 46940 - 47902 (-)
Gene ID: HRGMv2_1524_12_39
Type: TC
Location: 48482 - 50731 (+)
Gene ID: HRGMv2_1524_12_40
Type: TC
Location: 51095 - 51607 (+)
Gene ID: HRGMv2_1524_12_41
Type: pfam
Location: 51614 - 52480 (+)
Gene ID: HRGMv2_1524_12_42
Type: TC
Location: 52580 - 54196 (+)
Gene ID: HRGMv2_1524_12_43
Type: CAZyme
Location: 54200 - 55582 (+)
Gene ID: HRGMv2_1524_12_44
Type: STP
Location: 56018 - 57850 (+)
Gene ID: HRGMv2_1524_12_45
Type: TC
Location: 57844 - 59655 (+)
Gene ID: HRGMv2_1524_12_46
Type:
Location: 59658 - 60713 (+)
Gene ID: HRGMv2_1524_12_47
Type: TC
Location: 60717 - 62093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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