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Cluster: HRGMv2_1524_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1524_5 HRGMv2_1524_5_63 67814 69319 + GH77
CAZyme HRGMv2_1524_5 HRGMv2_1524_5_64 69449 71716 + GT35
TC HRGMv2_1524_5 HRGMv2_1524_5_65 72172 73368 - 3.A.1.1.22
TC HRGMv2_1524_5 HRGMv2_1524_5_66 73437 74276 - 3.A.1.1.45
TC HRGMv2_1524_5 HRGMv2_1524_5_67 74276 75130 - 3.A.1.1.45
TC HRGMv2_1524_5 HRGMv2_1524_5_68 75218 76534 - 3.A.1.1.45
TF HRGMv2_1524_5 HRGMv2_1524_5_69 76841 77560 - GntR
NULL(UNKNOWN) HRGMv2_1524_5 HRGMv2_1524_5_70 77644 77763 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1524_5 HRGMv2_1524_5_71 77785 80235 + 4.A.1.1.8
Gene ID: HRGMv2_1524_5_63
Type: CAZyme
Location: 67814 - 69319 (+)
Gene ID: HRGMv2_1524_5_64
Type: CAZyme
Location: 69449 - 71716 (+)
Gene ID: HRGMv2_1524_5_65
Type: TC
Location: 72172 - 73368 (-)
Gene ID: HRGMv2_1524_5_66
Type: TC
Location: 73437 - 74276 (-)
Gene ID: HRGMv2_1524_5_67
Type: TC
Location: 74276 - 75130 (-)
Gene ID: HRGMv2_1524_5_68
Type: TC
Location: 75218 - 76534 (-)
Gene ID: HRGMv2_1524_5_69
Type: TF
Location: 76841 - 77560 (-)
Gene ID: HRGMv2_1524_5_70
Type:
Location: 77644 - 77763 (-)
Gene ID: HRGMv2_1524_5_71
Type: TC
Location: 77785 - 80235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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