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Cluster: HRGMv2_1523_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1523_3 HRGMv2_1523_3_23 26918 27256 - 4.A.3.1.2
TF HRGMv2_1523_3 HRGMv2_1523_3_24 27471 28475 - LacI
TC HRGMv2_1523_3 HRGMv2_1523_3_25 28832 30604 + 4.A.3.1.1
CAZyme HRGMv2_1523_3 HRGMv2_1523_3_26 30801 32240 + GH1
TF HRGMv2_1523_3 HRGMv2_1523_3_27 32734 33744 - LacI
TC HRGMv2_1523_3 HRGMv2_1523_3_28 34020 35777 + 4.A.3.1.1
CAZyme HRGMv2_1523_3 HRGMv2_1523_3_29 35853 37274 + GH1
Gene ID: HRGMv2_1523_3_23
Type: TC
Location: 26918 - 27256 (-)
Gene ID: HRGMv2_1523_3_24
Type: TF
Location: 27471 - 28475 (-)
Gene ID: HRGMv2_1523_3_25
Type: TC
Location: 28832 - 30604 (+)
Gene ID: HRGMv2_1523_3_26
Type: CAZyme
Location: 30801 - 32240 (+)
Gene ID: HRGMv2_1523_3_27
Type: TF
Location: 32734 - 33744 (-)
Gene ID: HRGMv2_1523_3_28
Type: TC
Location: 34020 - 35777 (+)
Gene ID: HRGMv2_1523_3_29
Type: CAZyme
Location: 35853 - 37274 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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