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Cluster: HRGMv2_1523_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1523_2 HRGMv2_1523_2_164 182171 184510 - 3.A.3.5.15
STP HRGMv2_1523_2 HRGMv2_1523_2_165 184761 186845 - Pkinase
STP HRGMv2_1523_2 HRGMv2_1523_2_166 187017 187979 - FHA
TC HRGMv2_1523_2 HRGMv2_1523_2_167 188487 190655 + 1.I.1.1.3
STP HRGMv2_1523_2 HRGMv2_1523_2_168 191273 192034 + Fer4
TC HRGMv2_1523_2 HRGMv2_1523_2_169 192315 192827 + 4.A.1.2.5
pfam HRGMv2_1523_2 HRGMv2_1523_2_170 192834 193700 + PRD | PRD | CAT_RBD
TC HRGMv2_1523_2 HRGMv2_1523_2_171 193800 195416 + 4.A.1.1.3
CAZyme HRGMv2_1523_2 HRGMv2_1523_2_172 195420 196802 + GH4
Gene ID: HRGMv2_1523_2_164
Type: TC
Location: 182171 - 184510 (-)
Gene ID: HRGMv2_1523_2_165
Type: STP
Location: 184761 - 186845 (-)
Gene ID: HRGMv2_1523_2_166
Type: STP
Location: 187017 - 187979 (-)
Gene ID: HRGMv2_1523_2_167
Type: TC
Location: 188487 - 190655 (+)
Gene ID: HRGMv2_1523_2_168
Type: STP
Location: 191273 - 192034 (+)
Gene ID: HRGMv2_1523_2_169
Type: TC
Location: 192315 - 192827 (+)
Gene ID: HRGMv2_1523_2_170
Type: pfam
Location: 192834 - 193700 (+)
Gene ID: HRGMv2_1523_2_171
Type: TC
Location: 193800 - 195416 (+)
Gene ID: HRGMv2_1523_2_172
Type: CAZyme
Location: 195420 - 196802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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