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Cluster: HRGMv2_1523_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1523_15 HRGMv2_1523_15_22 27703 28629 - CE7
TC HRGMv2_1523_15 HRGMv2_1523_15_23 28761 29588 - 3.A.1.5.27
TC HRGMv2_1523_15 HRGMv2_1523_15_24 29589 31604 - 3.A.1.5.25
TC HRGMv2_1523_15 HRGMv2_1523_15_25 31608 32564 - 3.A.1.5.38
TC HRGMv2_1523_15 HRGMv2_1523_15_26 32722 34335 - 3.A.1.5.27
pfam HRGMv2_1523_15 HRGMv2_1523_15_27 34701 36641 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1523_15 HRGMv2_1523_15_28 36648 38330 - 2.A.66.4.4
Gene ID: HRGMv2_1523_15_22
Type: CAZyme
Location: 27703 - 28629 (-)
Gene ID: HRGMv2_1523_15_23
Type: TC
Location: 28761 - 29588 (-)
Gene ID: HRGMv2_1523_15_24
Type: TC
Location: 29589 - 31604 (-)
Gene ID: HRGMv2_1523_15_25
Type: TC
Location: 31608 - 32564 (-)
Gene ID: HRGMv2_1523_15_26
Type: TC
Location: 32722 - 34335 (-)
Gene ID: HRGMv2_1523_15_27
Type: pfam
Location: 34701 - 36641 (-)
Gene ID: HRGMv2_1523_15_28
Type: TC
Location: 36648 - 38330 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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