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Cluster: HRGMv2_1523_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1523_15 HRGMv2_1523_15_2 3244 4977 - GH13_30
STP HRGMv2_1523_15 HRGMv2_1523_15_3 5564 6310 - STAS
STP HRGMv2_1523_15 HRGMv2_1523_15_4 6389 8734 - GAF | SpoIIE
TC HRGMv2_1523_15 HRGMv2_1523_15_5 9478 10506 - 3.A.1.5.36
TC HRGMv2_1523_15 HRGMv2_1523_15_6 10506 11597 - 3.A.1.5.34
TC HRGMv2_1523_15 HRGMv2_1523_15_7 11600 12535 - 3.A.1.5.11
TC HRGMv2_1523_15 HRGMv2_1523_15_8 12550 13587 - 3.A.1.5.37
TC HRGMv2_1523_15 HRGMv2_1523_15_9 13744 15420 - 3.A.1.5.35
Gene ID: HRGMv2_1523_15_2
Type: CAZyme
Location: 3244 - 4977 (-)
Gene ID: HRGMv2_1523_15_3
Type: STP
Location: 5564 - 6310 (-)
Gene ID: HRGMv2_1523_15_4
Type: STP
Location: 6389 - 8734 (-)
Gene ID: HRGMv2_1523_15_5
Type: TC
Location: 9478 - 10506 (-)
Gene ID: HRGMv2_1523_15_6
Type: TC
Location: 10506 - 11597 (-)
Gene ID: HRGMv2_1523_15_7
Type: TC
Location: 11600 - 12535 (-)
Gene ID: HRGMv2_1523_15_8
Type: TC
Location: 12550 - 13587 (-)
Gene ID: HRGMv2_1523_15_9
Type: TC
Location: 13744 - 15420 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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