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Cluster: HRGMv2_1523_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1523_8 HRGMv2_1523_8_43 59922 60671 - GH1
pfam HRGMv2_1523_8 HRGMv2_1523_8_44 60931 61332 - Glyco_hydro_1
STP HRGMv2_1523_8 HRGMv2_1523_8_45 61407 62339 - SIS
TC HRGMv2_1523_8 HRGMv2_1523_8_46 62336 62668 - 4.A.3.2.1
STP HRGMv2_1523_8 HRGMv2_1523_8_47 63386 63907 + SIS
TC HRGMv2_1523_8 HRGMv2_1523_8_48 63954 64256 + 4.A.3.2.6
TC HRGMv2_1523_8 HRGMv2_1523_8_49 64317 65615 + 4.A.3.2.2
CAZyme HRGMv2_1523_8 HRGMv2_1523_8_50 65710 66810 + GH170
Gene ID: HRGMv2_1523_8_43
Type: CAZyme
Location: 59922 - 60671 (-)
Gene ID: HRGMv2_1523_8_44
Type: pfam
Location: 60931 - 61332 (-)
Gene ID: HRGMv2_1523_8_45
Type: STP
Location: 61407 - 62339 (-)
Gene ID: HRGMv2_1523_8_46
Type: TC
Location: 62336 - 62668 (-)
Gene ID: HRGMv2_1523_8_47
Type: STP
Location: 63386 - 63907 (+)
Gene ID: HRGMv2_1523_8_48
Type: TC
Location: 63954 - 64256 (+)
Gene ID: HRGMv2_1523_8_49
Type: TC
Location: 64317 - 65615 (+)
Gene ID: HRGMv2_1523_8_50
Type: CAZyme
Location: 65710 - 66810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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