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Cluster: HRGMv2_1522_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1522_35 HRGMv2_1522_35_3 2633 5083 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1522_35 HRGMv2_1522_35_4 5105 5224 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1522_35 HRGMv2_1522_35_5 5308 6027 + GntR
TC HRGMv2_1522_35 HRGMv2_1522_35_6 6334 7650 + 3.A.1.1.45
TC HRGMv2_1522_35 HRGMv2_1522_35_7 7738 8592 + 3.A.1.1.45
TC HRGMv2_1522_35 HRGMv2_1522_35_8 8592 9431 + 3.A.1.1.45
TC HRGMv2_1522_35 HRGMv2_1522_35_9 9500 10699 + 3.A.1.1.22
CAZyme HRGMv2_1522_35 HRGMv2_1522_35_10 11155 13422 - GT35
CAZyme HRGMv2_1522_35 HRGMv2_1522_35_11 13551 15056 - GH77
Gene ID: HRGMv2_1522_35_3
Type: TC
Location: 2633 - 5083 (-)
Gene ID: HRGMv2_1522_35_4
Type:
Location: 5105 - 5224 (+)
Gene ID: HRGMv2_1522_35_5
Type: TF
Location: 5308 - 6027 (+)
Gene ID: HRGMv2_1522_35_6
Type: TC
Location: 6334 - 7650 (+)
Gene ID: HRGMv2_1522_35_7
Type: TC
Location: 7738 - 8592 (+)
Gene ID: HRGMv2_1522_35_8
Type: TC
Location: 8592 - 9431 (+)
Gene ID: HRGMv2_1522_35_9
Type: TC
Location: 9500 - 10699 (+)
Gene ID: HRGMv2_1522_35_10
Type: CAZyme
Location: 11155 - 13422 (-)
Gene ID: HRGMv2_1522_35_11
Type: CAZyme
Location: 13551 - 15056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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