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Cluster: HRGMv2_1521_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1521_41 HRGMv2_1521_41_8 5398 6567 - CE9
STP HRGMv2_1521_41 HRGMv2_1521_41_9 6686 7852 - SIS | SIS
TF HRGMv2_1521_41 HRGMv2_1521_41_10 7967 8698 - GntR
TC HRGMv2_1521_41 HRGMv2_1521_41_11 8883 9965 - 4.A.6.1.4
TC HRGMv2_1521_41 HRGMv2_1521_41_12 9955 10755 - 4.A.6.1.4
TC HRGMv2_1521_41 HRGMv2_1521_41_13 10846 11328 - 4.A.6.1.4
pfam HRGMv2_1521_41 HRGMv2_1521_41_14 11365 11646 - YajC
TC HRGMv2_1521_41 HRGMv2_1521_41_15 11646 12089 - 4.A.6.1.16
Gene ID: HRGMv2_1521_41_8
Type: CAZyme
Location: 5398 - 6567 (-)
Gene ID: HRGMv2_1521_41_9
Type: STP
Location: 6686 - 7852 (-)
Gene ID: HRGMv2_1521_41_10
Type: TF
Location: 7967 - 8698 (-)
Gene ID: HRGMv2_1521_41_11
Type: TC
Location: 8883 - 9965 (-)
Gene ID: HRGMv2_1521_41_12
Type: TC
Location: 9955 - 10755 (-)
Gene ID: HRGMv2_1521_41_13
Type: TC
Location: 10846 - 11328 (-)
Gene ID: HRGMv2_1521_41_14
Type: pfam
Location: 11365 - 11646 (-)
Gene ID: HRGMv2_1521_41_15
Type: TC
Location: 11646 - 12089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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