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Cluster: HRGMv2_1520_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1520_41 HRGMv2_1520_41_1 3 1382 + 1.I.1.1.3
STP HRGMv2_1520_41 HRGMv2_1520_41_2 2001 2762 + Fer4 | Fer4
TC HRGMv2_1520_41 HRGMv2_1520_41_3 3165 3677 + 4.A.1.2.5
pfam HRGMv2_1520_41 HRGMv2_1520_41_4 3684 4550 + PRD | PRD | CAT_RBD
TC HRGMv2_1520_41 HRGMv2_1520_41_5 4650 6266 + 4.A.1.1.3
CAZyme HRGMv2_1520_41 HRGMv2_1520_41_6 6270 7652 + GH4
STP HRGMv2_1520_41 HRGMv2_1520_41_7 7909 9741 + Pyr_redox_2
TC HRGMv2_1520_41 HRGMv2_1520_41_8 9735 11546 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1520_41 HRGMv2_1520_41_9 11549 12607 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1520_41 HRGMv2_1520_41_10 12611 13987 + 3.A.1.125.5
Gene ID: HRGMv2_1520_41_1
Type: TC
Location: 3 - 1382 (+)
Gene ID: HRGMv2_1520_41_2
Type: STP
Location: 2001 - 2762 (+)
Gene ID: HRGMv2_1520_41_3
Type: TC
Location: 3165 - 3677 (+)
Gene ID: HRGMv2_1520_41_4
Type: pfam
Location: 3684 - 4550 (+)
Gene ID: HRGMv2_1520_41_5
Type: TC
Location: 4650 - 6266 (+)
Gene ID: HRGMv2_1520_41_6
Type: CAZyme
Location: 6270 - 7652 (+)
Gene ID: HRGMv2_1520_41_7
Type: STP
Location: 7909 - 9741 (+)
Gene ID: HRGMv2_1520_41_8
Type: TC
Location: 9735 - 11546 (+)
Gene ID: HRGMv2_1520_41_9
Type:
Location: 11549 - 12607 (+)
Gene ID: HRGMv2_1520_41_10
Type: TC
Location: 12611 - 13987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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