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Cluster: HRGMv2_1520_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1520_58 HRGMv2_1520_58_1 134 1555 - GH1
TC HRGMv2_1520_58 HRGMv2_1520_58_2 1631 3388 - 4.A.3.1.1
TF HRGMv2_1520_58 HRGMv2_1520_58_3 3674 4675 + LacI
CAZyme HRGMv2_1520_58 HRGMv2_1520_58_4 4944 6383 - GH1
TC HRGMv2_1520_58 HRGMv2_1520_58_5 6450 8222 - 4.A.3.1.1
TF HRGMv2_1520_58 HRGMv2_1520_58_6 8578 9582 + LacI
TC HRGMv2_1520_58 HRGMv2_1520_58_7 9796 10134 + 4.A.3.1.2
Gene ID: HRGMv2_1520_58_1
Type: CAZyme
Location: 134 - 1555 (-)
Gene ID: HRGMv2_1520_58_2
Type: TC
Location: 1631 - 3388 (-)
Gene ID: HRGMv2_1520_58_3
Type: TF
Location: 3674 - 4675 (+)
Gene ID: HRGMv2_1520_58_4
Type: CAZyme
Location: 4944 - 6383 (-)
Gene ID: HRGMv2_1520_58_5
Type: TC
Location: 6450 - 8222 (-)
Gene ID: HRGMv2_1520_58_6
Type: TF
Location: 8578 - 9582 (+)
Gene ID: HRGMv2_1520_58_7
Type: TC
Location: 9796 - 10134 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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