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Cluster: HRGMv2_1519_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1519_18 HRGMv2_1519_18_1 2 805 + GT35
TC HRGMv2_1519_18 HRGMv2_1519_18_2 1341 2540 - 3.A.1.1.22
TC HRGMv2_1519_18 HRGMv2_1519_18_3 2609 3448 - 3.A.1.1.45
TC HRGMv2_1519_18 HRGMv2_1519_18_4 3448 4302 - 3.A.1.1.45
TC HRGMv2_1519_18 HRGMv2_1519_18_5 4390 5706 - 3.A.1.1.45
TF HRGMv2_1519_18 HRGMv2_1519_18_6 6013 6732 - GntR
NULL(UNKNOWN) HRGMv2_1519_18 HRGMv2_1519_18_7 6816 6935 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1519_18 HRGMv2_1519_18_8 6957 9407 + 4.A.1.1.8
Gene ID: HRGMv2_1519_18_1
Type: CAZyme
Location: 2 - 805 (+)
Gene ID: HRGMv2_1519_18_2
Type: TC
Location: 1341 - 2540 (-)
Gene ID: HRGMv2_1519_18_3
Type: TC
Location: 2609 - 3448 (-)
Gene ID: HRGMv2_1519_18_4
Type: TC
Location: 3448 - 4302 (-)
Gene ID: HRGMv2_1519_18_5
Type: TC
Location: 4390 - 5706 (-)
Gene ID: HRGMv2_1519_18_6
Type: TF
Location: 6013 - 6732 (-)
Gene ID: HRGMv2_1519_18_7
Type:
Location: 6816 - 6935 (-)
Gene ID: HRGMv2_1519_18_8
Type: TC
Location: 6957 - 9407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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