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Cluster: HRGMv2_1518_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1518_9 HRGMv2_1518_9_21 19209 19691 + 4.A.6.1.4
sulfatase HRGMv2_1518_9 HRGMv2_1518_9_22 20018 21070 - S1_4
TF HRGMv2_1518_9 HRGMv2_1518_9_23 21276 22040 + HTH_DeoR
CAZyme HRGMv2_1518_9 HRGMv2_1518_9_24 22649 24070 - GH1
TC HRGMv2_1518_9 HRGMv2_1518_9_25 24146 25924 - 4.A.3.1.1
TF HRGMv2_1518_9 HRGMv2_1518_9_26 26210 27211 + LacI
CAZyme HRGMv2_1518_9 HRGMv2_1518_9_27 27579 29018 - GH1
TC HRGMv2_1518_9 HRGMv2_1518_9_28 29085 30857 - 4.A.3.1.1
TF HRGMv2_1518_9 HRGMv2_1518_9_29 31214 32218 + LacI
TC HRGMv2_1518_9 HRGMv2_1518_9_30 32432 32770 + 4.A.3.1.2
Gene ID: HRGMv2_1518_9_21
Type: TC
Location: 19209 - 19691 (+)
Gene ID: HRGMv2_1518_9_22
Type: sulfatase
Location: 20018 - 21070 (-)
Gene ID: HRGMv2_1518_9_23
Type: TF
Location: 21276 - 22040 (+)
Gene ID: HRGMv2_1518_9_24
Type: CAZyme
Location: 22649 - 24070 (-)
Gene ID: HRGMv2_1518_9_25
Type: TC
Location: 24146 - 25924 (-)
Gene ID: HRGMv2_1518_9_26
Type: TF
Location: 26210 - 27211 (+)
Gene ID: HRGMv2_1518_9_27
Type: CAZyme
Location: 27579 - 29018 (-)
Gene ID: HRGMv2_1518_9_28
Type: TC
Location: 29085 - 30857 (-)
Gene ID: HRGMv2_1518_9_29
Type: TF
Location: 31214 - 32218 (+)
Gene ID: HRGMv2_1518_9_30
Type: TC
Location: 32432 - 32770 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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