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Cluster: HRGMv2_1518_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1518_52 HRGMv2_1518_52_1 41 1723 + 2.A.66.4.4
pfam HRGMv2_1518_52 HRGMv2_1518_52_2 1730 3670 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1518_52 HRGMv2_1518_52_3 4036 5649 + 3.A.1.5.27
TC HRGMv2_1518_52 HRGMv2_1518_52_4 5807 6763 + 3.A.1.5.38
TC HRGMv2_1518_52 HRGMv2_1518_52_5 6767 8782 + 3.A.1.5.25
TC HRGMv2_1518_52 HRGMv2_1518_52_6 8783 9610 + 3.A.1.5.27
CAZyme HRGMv2_1518_52 HRGMv2_1518_52_7 9742 10668 + CE7
Gene ID: HRGMv2_1518_52_1
Type: TC
Location: 41 - 1723 (+)
Gene ID: HRGMv2_1518_52_2
Type: pfam
Location: 1730 - 3670 (+)
Gene ID: HRGMv2_1518_52_3
Type: TC
Location: 4036 - 5649 (+)
Gene ID: HRGMv2_1518_52_4
Type: TC
Location: 5807 - 6763 (+)
Gene ID: HRGMv2_1518_52_5
Type: TC
Location: 6767 - 8782 (+)
Gene ID: HRGMv2_1518_52_6
Type: TC
Location: 8783 - 9610 (+)
Gene ID: HRGMv2_1518_52_7
Type: CAZyme
Location: 9742 - 10668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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