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Cluster: HRGMv2_1518_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1518_48 HRGMv2_1518_48_4 1268 3607 - 3.A.3.5.15
STP HRGMv2_1518_48 HRGMv2_1518_48_5 4100 6184 - Pkinase
STP HRGMv2_1518_48 HRGMv2_1518_48_6 6356 7318 - FHA
TC HRGMv2_1518_48 HRGMv2_1518_48_7 7817 10066 + 1.I.1.1.3
TC HRGMv2_1518_48 HRGMv2_1518_48_8 10543 11055 + 4.A.1.2.11
pfam HRGMv2_1518_48 HRGMv2_1518_48_9 11062 11928 + PRD | PRD | CAT_RBD
TC HRGMv2_1518_48 HRGMv2_1518_48_10 12028 13644 + 4.A.1.1.3
CAZyme HRGMv2_1518_48 HRGMv2_1518_48_11 13648 15030 + GH4
Gene ID: HRGMv2_1518_48_4
Type: TC
Location: 1268 - 3607 (-)
Gene ID: HRGMv2_1518_48_5
Type: STP
Location: 4100 - 6184 (-)
Gene ID: HRGMv2_1518_48_6
Type: STP
Location: 6356 - 7318 (-)
Gene ID: HRGMv2_1518_48_7
Type: TC
Location: 7817 - 10066 (+)
Gene ID: HRGMv2_1518_48_8
Type: TC
Location: 10543 - 11055 (+)
Gene ID: HRGMv2_1518_48_9
Type: pfam
Location: 11062 - 11928 (+)
Gene ID: HRGMv2_1518_48_10
Type: TC
Location: 12028 - 13644 (+)
Gene ID: HRGMv2_1518_48_11
Type: CAZyme
Location: 13648 - 15030 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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