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Cluster: HRGMv2_1513_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1513_31 HRGMv2_1513_31_5 7462 9879 - 4.A.1.1.8
TF HRGMv2_1513_31 HRGMv2_1513_31_6 10142 10861 + GntR
TC HRGMv2_1513_31 HRGMv2_1513_31_7 11168 12484 + 3.A.1.1.45
TC HRGMv2_1513_31 HRGMv2_1513_31_8 12572 13426 + 3.A.1.1.45
TC HRGMv2_1513_31 HRGMv2_1513_31_9 13426 14265 + 3.A.1.1.45
TC HRGMv2_1513_31 HRGMv2_1513_31_10 14334 15533 + 3.A.1.1.22
CAZyme HRGMv2_1513_31 HRGMv2_1513_31_11 15990 18257 - GT35
CAZyme HRGMv2_1513_31 HRGMv2_1513_31_12 18387 19892 - GH77
Gene ID: HRGMv2_1513_31_5
Type: TC
Location: 7462 - 9879 (-)
Gene ID: HRGMv2_1513_31_6
Type: TF
Location: 10142 - 10861 (+)
Gene ID: HRGMv2_1513_31_7
Type: TC
Location: 11168 - 12484 (+)
Gene ID: HRGMv2_1513_31_8
Type: TC
Location: 12572 - 13426 (+)
Gene ID: HRGMv2_1513_31_9
Type: TC
Location: 13426 - 14265 (+)
Gene ID: HRGMv2_1513_31_10
Type: TC
Location: 14334 - 15533 (+)
Gene ID: HRGMv2_1513_31_11
Type: CAZyme
Location: 15990 - 18257 (-)
Gene ID: HRGMv2_1513_31_12
Type: CAZyme
Location: 18387 - 19892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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