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Cluster: HRGMv2_1513_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1513_15 HRGMv2_1513_15_32 37233 37571 - 4.A.3.1.2
TF HRGMv2_1513_15 HRGMv2_1513_15_33 37786 38790 - LacI
TC HRGMv2_1513_15 HRGMv2_1513_15_34 39148 40920 + 4.A.3.1.1
CAZyme HRGMv2_1513_15 HRGMv2_1513_15_35 41117 42556 + GH1
TF HRGMv2_1513_15 HRGMv2_1513_15_36 42826 43863 - LacI
CAZyme HRGMv2_1513_15 HRGMv2_1513_15_37 44205 45647 + GH1
TC HRGMv2_1513_15 HRGMv2_1513_15_38 45824 47584 + 4.A.3.1.1
TF HRGMv2_1513_15 HRGMv2_1513_15_39 47919 48929 - LacI
TC HRGMv2_1513_15 HRGMv2_1513_15_40 49205 50983 + 4.A.3.1.1
CAZyme HRGMv2_1513_15 HRGMv2_1513_15_41 51059 52480 + GH1
Gene ID: HRGMv2_1513_15_32
Type: TC
Location: 37233 - 37571 (-)
Gene ID: HRGMv2_1513_15_33
Type: TF
Location: 37786 - 38790 (-)
Gene ID: HRGMv2_1513_15_34
Type: TC
Location: 39148 - 40920 (+)
Gene ID: HRGMv2_1513_15_35
Type: CAZyme
Location: 41117 - 42556 (+)
Gene ID: HRGMv2_1513_15_36
Type: TF
Location: 42826 - 43863 (-)
Gene ID: HRGMv2_1513_15_37
Type: CAZyme
Location: 44205 - 45647 (+)
Gene ID: HRGMv2_1513_15_38
Type: TC
Location: 45824 - 47584 (+)
Gene ID: HRGMv2_1513_15_39
Type: TF
Location: 47919 - 48929 (-)
Gene ID: HRGMv2_1513_15_40
Type: TC
Location: 49205 - 50983 (+)
Gene ID: HRGMv2_1513_15_41
Type: CAZyme
Location: 51059 - 52480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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