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Cluster: HRGMv2_1513_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1513_9 HRGMv2_1513_9_36 42169 44508 - 3.A.3.5.15
STP HRGMv2_1513_9 HRGMv2_1513_9_37 45001 47085 - Pkinase
STP HRGMv2_1513_9 HRGMv2_1513_9_38 47257 48219 - FHA
TC HRGMv2_1513_9 HRGMv2_1513_9_39 48719 50962 + 1.I.1.1.3
STP HRGMv2_1513_9 HRGMv2_1513_9_40 51581 52342 + Fer4
TC HRGMv2_1513_9 HRGMv2_1513_9_41 52622 53134 + 4.A.1.2.5
pfam HRGMv2_1513_9 HRGMv2_1513_9_42 53153 54007 + PRD | PRD | CAT_RBD
TC HRGMv2_1513_9 HRGMv2_1513_9_43 54107 55723 + 4.A.1.1.3
CAZyme HRGMv2_1513_9 HRGMv2_1513_9_44 55727 57109 + GH4
Gene ID: HRGMv2_1513_9_36
Type: TC
Location: 42169 - 44508 (-)
Gene ID: HRGMv2_1513_9_37
Type: STP
Location: 45001 - 47085 (-)
Gene ID: HRGMv2_1513_9_38
Type: STP
Location: 47257 - 48219 (-)
Gene ID: HRGMv2_1513_9_39
Type: TC
Location: 48719 - 50962 (+)
Gene ID: HRGMv2_1513_9_40
Type: STP
Location: 51581 - 52342 (+)
Gene ID: HRGMv2_1513_9_41
Type: TC
Location: 52622 - 53134 (+)
Gene ID: HRGMv2_1513_9_42
Type: pfam
Location: 53153 - 54007 (+)
Gene ID: HRGMv2_1513_9_43
Type: TC
Location: 54107 - 55723 (+)
Gene ID: HRGMv2_1513_9_44
Type: CAZyme
Location: 55727 - 57109 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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