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Cluster: HRGMv2_1512_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1512_39 HRGMv2_1512_39_4 2802 4307 + GH77
CAZyme HRGMv2_1512_39 HRGMv2_1512_39_5 4437 6704 + GT35
TC HRGMv2_1512_39 HRGMv2_1512_39_6 7161 8357 - 3.A.1.1.22
TC HRGMv2_1512_39 HRGMv2_1512_39_7 8426 9265 - 3.A.1.1.45
TC HRGMv2_1512_39 HRGMv2_1512_39_8 9265 10119 - 3.A.1.1.45
TC HRGMv2_1512_39 HRGMv2_1512_39_9 10207 11523 - 3.A.1.1.45
TF HRGMv2_1512_39 HRGMv2_1512_39_10 11830 12549 - GntR
NULL(UNKNOWN) HRGMv2_1512_39 HRGMv2_1512_39_11 12633 12752 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1512_39 HRGMv2_1512_39_12 12774 15224 + 4.A.1.1.8
Gene ID: HRGMv2_1512_39_4
Type: CAZyme
Location: 2802 - 4307 (+)
Gene ID: HRGMv2_1512_39_5
Type: CAZyme
Location: 4437 - 6704 (+)
Gene ID: HRGMv2_1512_39_6
Type: TC
Location: 7161 - 8357 (-)
Gene ID: HRGMv2_1512_39_7
Type: TC
Location: 8426 - 9265 (-)
Gene ID: HRGMv2_1512_39_8
Type: TC
Location: 9265 - 10119 (-)
Gene ID: HRGMv2_1512_39_9
Type: TC
Location: 10207 - 11523 (-)
Gene ID: HRGMv2_1512_39_10
Type: TF
Location: 11830 - 12549 (-)
Gene ID: HRGMv2_1512_39_11
Type:
Location: 12633 - 12752 (-)
Gene ID: HRGMv2_1512_39_12
Type: TC
Location: 12774 - 15224 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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