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Cluster: HRGMv2_1511_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1511_3 HRGMv2_1511_3_71 79334 80710 - GH13_20
TC HRGMv2_1511_3 HRGMv2_1511_3_72 80864 82060 - 2.A.1.2.18
TC HRGMv2_1511_3 HRGMv2_1511_3_73 82182 84542 - 9.A.8.1.6
peptidase HRGMv2_1511_3 HRGMv2_1511_3_74 84798 85700 - S09.UPW
TC HRGMv2_1511_3 HRGMv2_1511_3_75 85945 86508 + 4.A.1.2.6
pfam HRGMv2_1511_3 HRGMv2_1511_3_76 86690 88093 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1511_3 HRGMv2_1511_3_77 88343 89128 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1511_3 HRGMv2_1511_3_78 89289 90269 + 3.A.1.34.1
TC HRGMv2_1511_3 HRGMv2_1511_3_79 90474 91397 + 3.A.1.34.1
TC HRGMv2_1511_3 HRGMv2_1511_3_80 91390 92184 + 3.A.1.34.1
pfam HRGMv2_1511_3 HRGMv2_1511_3_81 92257 94287 + Metallophos | 5_nucleotid_C
TC HRGMv2_1511_3 HRGMv2_1511_3_82 94416 95183 + 1.A.23.4.10
pfam HRGMv2_1511_3 HRGMv2_1511_3_83 95277 97193 + Bmp
pfam HRGMv2_1511_3 HRGMv2_1511_3_84 97190 97900 + Metallophos | Metallophos_2
TC HRGMv2_1511_3 HRGMv2_1511_3_85 98028 98735 - 1.C.82.1.1
Gene ID: HRGMv2_1511_3_71
Type: CAZyme
Location: 79334 - 80710 (-)
Gene ID: HRGMv2_1511_3_72
Type: TC
Location: 80864 - 82060 (-)
Gene ID: HRGMv2_1511_3_73
Type: TC
Location: 82182 - 84542 (-)
Gene ID: HRGMv2_1511_3_74
Type: peptidase
Location: 84798 - 85700 (-)
Gene ID: HRGMv2_1511_3_75
Type: TC
Location: 85945 - 86508 (+)
Gene ID: HRGMv2_1511_3_76
Type: pfam
Location: 86690 - 88093 (+)
Gene ID: HRGMv2_1511_3_77
Type:
Location: 88343 - 89128 (+)
Gene ID: HRGMv2_1511_3_78
Type: TC
Location: 89289 - 90269 (+)
Gene ID: HRGMv2_1511_3_79
Type: TC
Location: 90474 - 91397 (+)
Gene ID: HRGMv2_1511_3_80
Type: TC
Location: 91390 - 92184 (+)
Gene ID: HRGMv2_1511_3_81
Type: pfam
Location: 92257 - 94287 (+)
Gene ID: HRGMv2_1511_3_82
Type: TC
Location: 94416 - 95183 (+)
Gene ID: HRGMv2_1511_3_83
Type: pfam
Location: 95277 - 97193 (+)
Gene ID: HRGMv2_1511_3_84
Type: pfam
Location: 97190 - 97900 (+)
Gene ID: HRGMv2_1511_3_85
Type: TC
Location: 98028 - 98735 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1511_3_81 vegan > omnivore 1.87883 0.01260
HRGMv2_1511_3_81 vegetarian > omnivore 1.38627 0.01054

🧭 Explore Read Mapping of CGC

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