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Cluster: HRGMv2_1511_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1511_38 HRGMv2_1511_38_6 6406 7770 - 3.A.1.17.10
pfam HRGMv2_1511_38 HRGMv2_1511_38_7 7774 8829 - NMT1
TC HRGMv2_1511_38 HRGMv2_1511_38_8 8832 10643 - 3.D.1.5.1
STP HRGMv2_1511_38 HRGMv2_1511_38_9 10637 12469 - Pyr_redox_2
CAZyme HRGMv2_1511_38 HRGMv2_1511_38_10 12727 14109 - GH4
TC HRGMv2_1511_38 HRGMv2_1511_38_11 14113 15729 - 4.A.1.1.3
pfam HRGMv2_1511_38 HRGMv2_1511_38_12 15829 16695 - PRD | PRD | CAT_RBD
TC HRGMv2_1511_38 HRGMv2_1511_38_13 16702 17214 - 4.A.1.2.5
Gene ID: HRGMv2_1511_38_6
Type: TC
Location: 6406 - 7770 (-)
Gene ID: HRGMv2_1511_38_7
Type: pfam
Location: 7774 - 8829 (-)
Gene ID: HRGMv2_1511_38_8
Type: TC
Location: 8832 - 10643 (-)
Gene ID: HRGMv2_1511_38_9
Type: STP
Location: 10637 - 12469 (-)
Gene ID: HRGMv2_1511_38_10
Type: CAZyme
Location: 12727 - 14109 (-)
Gene ID: HRGMv2_1511_38_11
Type: TC
Location: 14113 - 15729 (-)
Gene ID: HRGMv2_1511_38_12
Type: pfam
Location: 15829 - 16695 (-)
Gene ID: HRGMv2_1511_38_13
Type: TC
Location: 16702 - 17214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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