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Cluster: HRGMv2_1510_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1510_45 HRGMv2_1510_45_6 4699 6120 - GH1
TC HRGMv2_1510_45 HRGMv2_1510_45_7 6195 7973 - 4.A.3.1.1
TF HRGMv2_1510_45 HRGMv2_1510_45_8 8250 9260 + LacI
CAZyme HRGMv2_1510_45 HRGMv2_1510_45_9 9756 11195 - GH1
TC HRGMv2_1510_45 HRGMv2_1510_45_10 11262 13034 - 4.A.3.1.1
TF HRGMv2_1510_45 HRGMv2_1510_45_11 13391 14395 + LacI
TC HRGMv2_1510_45 HRGMv2_1510_45_12 14610 14948 + 4.A.3.1.2
Gene ID: HRGMv2_1510_45_6
Type: CAZyme
Location: 4699 - 6120 (-)
Gene ID: HRGMv2_1510_45_7
Type: TC
Location: 6195 - 7973 (-)
Gene ID: HRGMv2_1510_45_8
Type: TF
Location: 8250 - 9260 (+)
Gene ID: HRGMv2_1510_45_9
Type: CAZyme
Location: 9756 - 11195 (-)
Gene ID: HRGMv2_1510_45_10
Type: TC
Location: 11262 - 13034 (-)
Gene ID: HRGMv2_1510_45_11
Type: TF
Location: 13391 - 14395 (+)
Gene ID: HRGMv2_1510_45_12
Type: TC
Location: 14610 - 14948 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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