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Cluster: HRGMv2_1510_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1510_24 HRGMv2_1510_24_11 14989 17439 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1510_24 HRGMv2_1510_24_12 17461 17580 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1510_24 HRGMv2_1510_24_13 17664 18383 + GntR
TC HRGMv2_1510_24 HRGMv2_1510_24_14 18690 20006 + 3.A.1.1.45
TC HRGMv2_1510_24 HRGMv2_1510_24_15 20094 20948 + 3.A.1.1.45
TC HRGMv2_1510_24 HRGMv2_1510_24_16 20948 21787 + 3.A.1.1.45
TC HRGMv2_1510_24 HRGMv2_1510_24_17 21856 23055 + 3.A.1.1.22
CAZyme HRGMv2_1510_24 HRGMv2_1510_24_18 23511 25778 - GT35
CAZyme HRGMv2_1510_24 HRGMv2_1510_24_19 25907 27412 - GH77
Gene ID: HRGMv2_1510_24_11
Type: TC
Location: 14989 - 17439 (-)
Gene ID: HRGMv2_1510_24_12
Type:
Location: 17461 - 17580 (+)
Gene ID: HRGMv2_1510_24_13
Type: TF
Location: 17664 - 18383 (+)
Gene ID: HRGMv2_1510_24_14
Type: TC
Location: 18690 - 20006 (+)
Gene ID: HRGMv2_1510_24_15
Type: TC
Location: 20094 - 20948 (+)
Gene ID: HRGMv2_1510_24_16
Type: TC
Location: 20948 - 21787 (+)
Gene ID: HRGMv2_1510_24_17
Type: TC
Location: 21856 - 23055 (+)
Gene ID: HRGMv2_1510_24_18
Type: CAZyme
Location: 23511 - 25778 (-)
Gene ID: HRGMv2_1510_24_19
Type: CAZyme
Location: 25907 - 27412 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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