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Cluster: HRGMv2_1510_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1510_23 HRGMv2_1510_23_10 13612 15294 + 2.A.66.4.4
pfam HRGMv2_1510_23 HRGMv2_1510_23_11 15301 17241 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1510_23 HRGMv2_1510_23_12 17607 19220 + 3.A.1.5.27
TC HRGMv2_1510_23 HRGMv2_1510_23_13 19376 20332 + 3.A.1.5.38
TC HRGMv2_1510_23 HRGMv2_1510_23_14 20336 22351 + 3.A.1.5.25
TC HRGMv2_1510_23 HRGMv2_1510_23_15 22352 23179 + 3.A.1.5.27
CAZyme HRGMv2_1510_23 HRGMv2_1510_23_16 23311 24237 + CE7
Gene ID: HRGMv2_1510_23_10
Type: TC
Location: 13612 - 15294 (+)
Gene ID: HRGMv2_1510_23_11
Type: pfam
Location: 15301 - 17241 (+)
Gene ID: HRGMv2_1510_23_12
Type: TC
Location: 17607 - 19220 (+)
Gene ID: HRGMv2_1510_23_13
Type: TC
Location: 19376 - 20332 (+)
Gene ID: HRGMv2_1510_23_14
Type: TC
Location: 20336 - 22351 (+)
Gene ID: HRGMv2_1510_23_15
Type: TC
Location: 22352 - 23179 (+)
Gene ID: HRGMv2_1510_23_16
Type: CAZyme
Location: 23311 - 24237 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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