dbCAN Logo

Cluster: HRGMv2_1507_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1507_18 HRGMv2_1507_18_12 10750 11193 + 4.A.6.1.16
pfam HRGMv2_1507_18 HRGMv2_1507_18_13 11193 11474 + YajC
TC HRGMv2_1507_18 HRGMv2_1507_18_14 11511 11993 + 4.A.6.1.4
TC HRGMv2_1507_18 HRGMv2_1507_18_15 12084 12884 + 4.A.6.1.4
TC HRGMv2_1507_18 HRGMv2_1507_18_16 12874 13956 + 4.A.6.1.4
TF HRGMv2_1507_18 HRGMv2_1507_18_17 14141 14872 + GntR
STP HRGMv2_1507_18 HRGMv2_1507_18_18 14987 16153 + SIS | SIS
CAZyme HRGMv2_1507_18 HRGMv2_1507_18_19 16271 17440 + CE9
Gene ID: HRGMv2_1507_18_12
Type: TC
Location: 10750 - 11193 (+)
Gene ID: HRGMv2_1507_18_13
Type: pfam
Location: 11193 - 11474 (+)
Gene ID: HRGMv2_1507_18_14
Type: TC
Location: 11511 - 11993 (+)
Gene ID: HRGMv2_1507_18_15
Type: TC
Location: 12084 - 12884 (+)
Gene ID: HRGMv2_1507_18_16
Type: TC
Location: 12874 - 13956 (+)
Gene ID: HRGMv2_1507_18_17
Type: TF
Location: 14141 - 14872 (+)
Gene ID: HRGMv2_1507_18_18
Type: STP
Location: 14987 - 16153 (+)
Gene ID: HRGMv2_1507_18_19
Type: CAZyme
Location: 16271 - 17440 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List