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Cluster: HRGMv2_1506_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1506_15 HRGMv2_1506_15_17 17760 18644 - CE7
TC HRGMv2_1506_15 HRGMv2_1506_15_18 18818 19645 - 3.A.1.5.27
TC HRGMv2_1506_15 HRGMv2_1506_15_19 19646 21661 - 3.A.1.5.25
TC HRGMv2_1506_15 HRGMv2_1506_15_20 21665 22621 - 3.A.1.5.38
TC HRGMv2_1506_15 HRGMv2_1506_15_21 22779 24392 - 3.A.1.5.27
pfam HRGMv2_1506_15 HRGMv2_1506_15_22 24746 26698 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1506_15 HRGMv2_1506_15_23 26705 28387 - 2.A.66.4.4
Gene ID: HRGMv2_1506_15_17
Type: CAZyme
Location: 17760 - 18644 (-)
Gene ID: HRGMv2_1506_15_18
Type: TC
Location: 18818 - 19645 (-)
Gene ID: HRGMv2_1506_15_19
Type: TC
Location: 19646 - 21661 (-)
Gene ID: HRGMv2_1506_15_20
Type: TC
Location: 21665 - 22621 (-)
Gene ID: HRGMv2_1506_15_21
Type: TC
Location: 22779 - 24392 (-)
Gene ID: HRGMv2_1506_15_22
Type: pfam
Location: 24746 - 26698 (-)
Gene ID: HRGMv2_1506_15_23
Type: TC
Location: 26705 - 28387 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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