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Cluster: HRGMv2_1506_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1506_10 HRGMv2_1506_10_4 2639 4015 - GH13_20
TC HRGMv2_1506_10 HRGMv2_1506_10_5 4168 5364 - 2.A.1.2.18
TC HRGMv2_1506_10 HRGMv2_1506_10_6 5489 7849 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1506_10 HRGMv2_1506_10_7 7971 8291 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1506_10 HRGMv2_1506_10_8 8339 9238 - S09.UPW
TC HRGMv2_1506_10 HRGMv2_1506_10_9 9483 10046 + 4.A.1.2.6
pfam HRGMv2_1506_10 HRGMv2_1506_10_10 10228 11631 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1506_10 HRGMv2_1506_10_11 11881 12666 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1506_10 HRGMv2_1506_10_12 12827 13807 + 3.A.1.34.1
TC HRGMv2_1506_10 HRGMv2_1506_10_13 14012 14935 + 3.A.1.34.1
TC HRGMv2_1506_10 HRGMv2_1506_10_14 14928 15722 + 3.A.1.34.1
pfam HRGMv2_1506_10 HRGMv2_1506_10_15 15880 17907 + Metallophos | 5_nucleotid_C
TC HRGMv2_1506_10 HRGMv2_1506_10_16 18036 18803 + 1.A.23.4.2
pfam HRGMv2_1506_10 HRGMv2_1506_10_17 18897 20813 + Bmp
pfam HRGMv2_1506_10 HRGMv2_1506_10_18 20810 21520 + Metallophos | Metallophos_2
TC HRGMv2_1506_10 HRGMv2_1506_10_19 21646 22353 - 1.C.82.1.1
Gene ID: HRGMv2_1506_10_4
Type: CAZyme
Location: 2639 - 4015 (-)
Gene ID: HRGMv2_1506_10_5
Type: TC
Location: 4168 - 5364 (-)
Gene ID: HRGMv2_1506_10_6
Type: TC
Location: 5489 - 7849 (-)
Gene ID: HRGMv2_1506_10_7
Type:
Location: 7971 - 8291 (-)
Gene ID: HRGMv2_1506_10_8
Type: peptidase
Location: 8339 - 9238 (-)
Gene ID: HRGMv2_1506_10_9
Type: TC
Location: 9483 - 10046 (+)
Gene ID: HRGMv2_1506_10_10
Type: pfam
Location: 10228 - 11631 (+)
Gene ID: HRGMv2_1506_10_11
Type:
Location: 11881 - 12666 (+)
Gene ID: HRGMv2_1506_10_12
Type: TC
Location: 12827 - 13807 (+)
Gene ID: HRGMv2_1506_10_13
Type: TC
Location: 14012 - 14935 (+)
Gene ID: HRGMv2_1506_10_14
Type: TC
Location: 14928 - 15722 (+)
Gene ID: HRGMv2_1506_10_15
Type: pfam
Location: 15880 - 17907 (+)
Gene ID: HRGMv2_1506_10_16
Type: TC
Location: 18036 - 18803 (+)
Gene ID: HRGMv2_1506_10_17
Type: pfam
Location: 18897 - 20813 (+)
Gene ID: HRGMv2_1506_10_18
Type: pfam
Location: 20810 - 21520 (+)
Gene ID: HRGMv2_1506_10_19
Type: TC
Location: 21646 - 22353 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1506_10_15 vegan > omnivore 1.81631 0.00701
HRGMv2_1506_10_15 vegetarian > omnivore 1.39429 0.01287

🧭 Explore Read Mapping of CGC

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