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Cluster: HRGMv2_1506_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1506_1 HRGMv2_1506_1_70 71994 73352 - 2.A.33.1.1
pfam HRGMv2_1506_1 HRGMv2_1506_1_71 73620 74543 - DHH | DHHA2
pfam HRGMv2_1506_1 HRGMv2_1506_1_72 74689 75642 - ROK
TC HRGMv2_1506_1 HRGMv2_1506_1_73 75830 76138 - 4.A.3.2.8
sulfatase HRGMv2_1506_1 HRGMv2_1506_1_74 76148 76831 - S1_11
pfam HRGMv2_1506_1 HRGMv2_1506_1_75 76957 77289 - PTS_IIA
TC HRGMv2_1506_1 HRGMv2_1506_1_76 77299 77601 - 4.A.3.2.9
TC HRGMv2_1506_1 HRGMv2_1506_1_77 77756 79108 - 4.A.3.2.2
CAZyme HRGMv2_1506_1 HRGMv2_1506_1_78 79229 80629 - GH1
Gene ID: HRGMv2_1506_1_70
Type: TC
Location: 71994 - 73352 (-)
Gene ID: HRGMv2_1506_1_71
Type: pfam
Location: 73620 - 74543 (-)
Gene ID: HRGMv2_1506_1_72
Type: pfam
Location: 74689 - 75642 (-)
Gene ID: HRGMv2_1506_1_73
Type: TC
Location: 75830 - 76138 (-)
Gene ID: HRGMv2_1506_1_74
Type: sulfatase
Location: 76148 - 76831 (-)
Gene ID: HRGMv2_1506_1_75
Type: pfam
Location: 76957 - 77289 (-)
Gene ID: HRGMv2_1506_1_76
Type: TC
Location: 77299 - 77601 (-)
Gene ID: HRGMv2_1506_1_77
Type: TC
Location: 77756 - 79108 (-)
Gene ID: HRGMv2_1506_1_78
Type: CAZyme
Location: 79229 - 80629 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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