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Cluster: HRGMv2_1506_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1506_30 HRGMv2_1506_30_5 3277 4782 + GH77
CAZyme HRGMv2_1506_30 HRGMv2_1506_30_6 4912 7179 + GT35
TC HRGMv2_1506_30 HRGMv2_1506_30_7 7635 8834 - 3.A.1.1.22
TC HRGMv2_1506_30 HRGMv2_1506_30_8 8903 9742 - 3.A.1.1.45
TC HRGMv2_1506_30 HRGMv2_1506_30_9 9742 10596 - 3.A.1.1.45
TC HRGMv2_1506_30 HRGMv2_1506_30_10 10684 12000 - 3.A.1.1.45
TF HRGMv2_1506_30 HRGMv2_1506_30_11 12307 13026 - GntR
NULL(UNKNOWN) HRGMv2_1506_30 HRGMv2_1506_30_12 13110 13229 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1506_30 HRGMv2_1506_30_13 13251 15701 + 4.A.1.1.8
Gene ID: HRGMv2_1506_30_5
Type: CAZyme
Location: 3277 - 4782 (+)
Gene ID: HRGMv2_1506_30_6
Type: CAZyme
Location: 4912 - 7179 (+)
Gene ID: HRGMv2_1506_30_7
Type: TC
Location: 7635 - 8834 (-)
Gene ID: HRGMv2_1506_30_8
Type: TC
Location: 8903 - 9742 (-)
Gene ID: HRGMv2_1506_30_9
Type: TC
Location: 9742 - 10596 (-)
Gene ID: HRGMv2_1506_30_10
Type: TC
Location: 10684 - 12000 (-)
Gene ID: HRGMv2_1506_30_11
Type: TF
Location: 12307 - 13026 (-)
Gene ID: HRGMv2_1506_30_12
Type:
Location: 13110 - 13229 (-)
Gene ID: HRGMv2_1506_30_13
Type: TC
Location: 13251 - 15701 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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