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Cluster: HRGMv2_1505_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1505_25 HRGMv2_1505_25_3 1040 2722 + 2.A.66.4.4
pfam HRGMv2_1505_25 HRGMv2_1505_25_4 2729 4669 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1505_25 HRGMv2_1505_25_5 5034 6647 + 3.A.1.5.27
TC HRGMv2_1505_25 HRGMv2_1505_25_6 6805 7761 + 3.A.1.5.38
TC HRGMv2_1505_25 HRGMv2_1505_25_7 7765 9780 + 3.A.1.5.25
TC HRGMv2_1505_25 HRGMv2_1505_25_8 9781 10608 + 3.A.1.5.27
CAZyme HRGMv2_1505_25 HRGMv2_1505_25_9 10782 11666 + CE7
Gene ID: HRGMv2_1505_25_3
Type: TC
Location: 1040 - 2722 (+)
Gene ID: HRGMv2_1505_25_4
Type: pfam
Location: 2729 - 4669 (+)
Gene ID: HRGMv2_1505_25_5
Type: TC
Location: 5034 - 6647 (+)
Gene ID: HRGMv2_1505_25_6
Type: TC
Location: 6805 - 7761 (+)
Gene ID: HRGMv2_1505_25_7
Type: TC
Location: 7765 - 9780 (+)
Gene ID: HRGMv2_1505_25_8
Type: TC
Location: 9781 - 10608 (+)
Gene ID: HRGMv2_1505_25_9
Type: CAZyme
Location: 10782 - 11666 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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