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Cluster: HRGMv2_1503_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1503_6 HRGMv2_1503_6_80 78165 79634 - 2.A.66.2.2
NULL(UNKNOWN) HRGMv2_1503_6 HRGMv2_1503_6_81 79624 80706 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1503_6 HRGMv2_1503_6_82 80764 81924 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1503_6 HRGMv2_1503_6_83 81921 82817 - GT2
CAZyme HRGMv2_1503_6 HRGMv2_1503_6_84 82817 83560 - GT32
pfam HRGMv2_1503_6 HRGMv2_1503_6_85 83565 84050 - Glyco_tran_28_C
pfam HRGMv2_1503_6 HRGMv2_1503_6_86 84062 84529 - Alg14
TC HRGMv2_1503_6 HRGMv2_1503_6_87 84530 85279 - 9.B.18.1.2
Gene ID: HRGMv2_1503_6_80
Type: TC
Location: 78165 - 79634 (-)
Gene ID: HRGMv2_1503_6_81
Type:
Location: 79624 - 80706 (-)
Gene ID: HRGMv2_1503_6_82
Type:
Location: 80764 - 81924 (-)
Gene ID: HRGMv2_1503_6_83
Type: CAZyme
Location: 81921 - 82817 (-)
Gene ID: HRGMv2_1503_6_84
Type: CAZyme
Location: 82817 - 83560 (-)
Gene ID: HRGMv2_1503_6_85
Type: pfam
Location: 83565 - 84050 (-)
Gene ID: HRGMv2_1503_6_86
Type: pfam
Location: 84062 - 84529 (-)
Gene ID: HRGMv2_1503_6_87
Type: TC
Location: 84530 - 85279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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