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Cluster: HRGMv2_1503_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1503_1 HRGMv2_1503_1_173 183284 185623 - 3.A.3.5.15
STP HRGMv2_1503_1 HRGMv2_1503_1_174 186197 188281 - Pkinase
STP HRGMv2_1503_1 HRGMv2_1503_1_175 188453 189415 - FHA
TC HRGMv2_1503_1 HRGMv2_1503_1_176 190015 192264 + 1.I.1.1.3
STP HRGMv2_1503_1 HRGMv2_1503_1_177 192883 193644 + Fer4
TC HRGMv2_1503_1 HRGMv2_1503_1_178 193988 194500 + 4.A.1.2.5
pfam HRGMv2_1503_1 HRGMv2_1503_1_179 194519 195373 + PRD | PRD | CAT_RBD
TC HRGMv2_1503_1 HRGMv2_1503_1_180 195473 197089 + 4.A.1.1.3
CAZyme HRGMv2_1503_1 HRGMv2_1503_1_181 197093 198475 + GH4
Gene ID: HRGMv2_1503_1_173
Type: TC
Location: 183284 - 185623 (-)
Gene ID: HRGMv2_1503_1_174
Type: STP
Location: 186197 - 188281 (-)
Gene ID: HRGMv2_1503_1_175
Type: STP
Location: 188453 - 189415 (-)
Gene ID: HRGMv2_1503_1_176
Type: TC
Location: 190015 - 192264 (+)
Gene ID: HRGMv2_1503_1_177
Type: STP
Location: 192883 - 193644 (+)
Gene ID: HRGMv2_1503_1_178
Type: TC
Location: 193988 - 194500 (+)
Gene ID: HRGMv2_1503_1_179
Type: pfam
Location: 194519 - 195373 (+)
Gene ID: HRGMv2_1503_1_180
Type: TC
Location: 195473 - 197089 (+)
Gene ID: HRGMv2_1503_1_181
Type: CAZyme
Location: 197093 - 198475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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