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Cluster: HRGMv2_1503_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1503_28 HRGMv2_1503_28_3 3024 4529 + GH77
CAZyme HRGMv2_1503_28 HRGMv2_1503_28_4 4659 6926 + GT35
TC HRGMv2_1503_28 HRGMv2_1503_28_5 7383 8582 - 3.A.1.1.22
TC HRGMv2_1503_28 HRGMv2_1503_28_6 8651 9490 - 3.A.1.1.45
TC HRGMv2_1503_28 HRGMv2_1503_28_7 9490 10344 - 3.A.1.1.45
TC HRGMv2_1503_28 HRGMv2_1503_28_8 10432 11748 - 3.A.1.1.45
TF HRGMv2_1503_28 HRGMv2_1503_28_9 12055 12774 - GntR
NULL(UNKNOWN) HRGMv2_1503_28 HRGMv2_1503_28_10 12858 12977 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1503_28 HRGMv2_1503_28_11 12999 15449 + 4.A.1.1.8
Gene ID: HRGMv2_1503_28_3
Type: CAZyme
Location: 3024 - 4529 (+)
Gene ID: HRGMv2_1503_28_4
Type: CAZyme
Location: 4659 - 6926 (+)
Gene ID: HRGMv2_1503_28_5
Type: TC
Location: 7383 - 8582 (-)
Gene ID: HRGMv2_1503_28_6
Type: TC
Location: 8651 - 9490 (-)
Gene ID: HRGMv2_1503_28_7
Type: TC
Location: 9490 - 10344 (-)
Gene ID: HRGMv2_1503_28_8
Type: TC
Location: 10432 - 11748 (-)
Gene ID: HRGMv2_1503_28_9
Type: TF
Location: 12055 - 12774 (-)
Gene ID: HRGMv2_1503_28_10
Type:
Location: 12858 - 12977 (-)
Gene ID: HRGMv2_1503_28_11
Type: TC
Location: 12999 - 15449 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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