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Cluster: HRGMv2_1501_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1501_6 HRGMv2_1501_6_5 4577 6001 + 4.A.1.2.3
NULL(UNKNOWN) HRGMv2_1501_6 HRGMv2_1501_6_6 6078 7295 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1501_6 HRGMv2_1501_6_7 7304 8215 + 2.A.69.4.3
pfam HRGMv2_1501_6 HRGMv2_1501_6_8 8399 9910 - Sde182_NH-like
peptidase HRGMv2_1501_6 HRGMv2_1501_6_9 10174 11511 - S09.UPW
TC HRGMv2_1501_6 HRGMv2_1501_6_10 12002 13429 + 4.A.1.2.11
CAZyme HRGMv2_1501_6 HRGMv2_1501_6_11 13529 14950 + GH140
Gene ID: HRGMv2_1501_6_5
Type: TC
Location: 4577 - 6001 (+)
Gene ID: HRGMv2_1501_6_6
Type:
Location: 6078 - 7295 (+)
Gene ID: HRGMv2_1501_6_7
Type: TC
Location: 7304 - 8215 (+)
Gene ID: HRGMv2_1501_6_8
Type: pfam
Location: 8399 - 9910 (-)
Gene ID: HRGMv2_1501_6_9
Type: peptidase
Location: 10174 - 11511 (-)
Gene ID: HRGMv2_1501_6_10
Type: TC
Location: 12002 - 13429 (+)
Gene ID: HRGMv2_1501_6_11
Type: CAZyme
Location: 13529 - 14950 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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