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Cluster: HRGMv2_1501_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1501_29 HRGMv2_1501_29_7 9509 11014 + GH77
CAZyme HRGMv2_1501_29 HRGMv2_1501_29_8 11143 13410 + GT35
TC HRGMv2_1501_29 HRGMv2_1501_29_9 13864 15063 - 3.A.1.1.22
TC HRGMv2_1501_29 HRGMv2_1501_29_10 15132 15971 - 3.A.1.1.45
TC HRGMv2_1501_29 HRGMv2_1501_29_11 15971 16825 - 3.A.1.1.45
TC HRGMv2_1501_29 HRGMv2_1501_29_12 16913 18229 - 3.A.1.1.45
TF HRGMv2_1501_29 HRGMv2_1501_29_13 18536 19255 - GntR
NULL(UNKNOWN) HRGMv2_1501_29 HRGMv2_1501_29_14 19339 19458 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1501_29 HRGMv2_1501_29_15 19480 21930 + 4.A.1.1.8
Gene ID: HRGMv2_1501_29_7
Type: CAZyme
Location: 9509 - 11014 (+)
Gene ID: HRGMv2_1501_29_8
Type: CAZyme
Location: 11143 - 13410 (+)
Gene ID: HRGMv2_1501_29_9
Type: TC
Location: 13864 - 15063 (-)
Gene ID: HRGMv2_1501_29_10
Type: TC
Location: 15132 - 15971 (-)
Gene ID: HRGMv2_1501_29_11
Type: TC
Location: 15971 - 16825 (-)
Gene ID: HRGMv2_1501_29_12
Type: TC
Location: 16913 - 18229 (-)
Gene ID: HRGMv2_1501_29_13
Type: TF
Location: 18536 - 19255 (-)
Gene ID: HRGMv2_1501_29_14
Type:
Location: 19339 - 19458 (-)
Gene ID: HRGMv2_1501_29_15
Type: TC
Location: 19480 - 21930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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