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Cluster: HRGMv2_1501_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1501_19 HRGMv2_1501_19_19 21351 22277 - CE7
TC HRGMv2_1501_19 HRGMv2_1501_19_20 22409 23236 - 3.A.1.5.27
TC HRGMv2_1501_19 HRGMv2_1501_19_21 23237 25252 - 3.A.1.5.25
TC HRGMv2_1501_19 HRGMv2_1501_19_22 25256 26212 - 3.A.1.5.38
TC HRGMv2_1501_19 HRGMv2_1501_19_23 26370 27983 - 3.A.1.5.27
pfam HRGMv2_1501_19 HRGMv2_1501_19_24 28349 30289 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1501_19 HRGMv2_1501_19_25 30296 31978 - 2.A.66.4.4
Gene ID: HRGMv2_1501_19_19
Type: CAZyme
Location: 21351 - 22277 (-)
Gene ID: HRGMv2_1501_19_20
Type: TC
Location: 22409 - 23236 (-)
Gene ID: HRGMv2_1501_19_21
Type: TC
Location: 23237 - 25252 (-)
Gene ID: HRGMv2_1501_19_22
Type: TC
Location: 25256 - 26212 (-)
Gene ID: HRGMv2_1501_19_23
Type: TC
Location: 26370 - 27983 (-)
Gene ID: HRGMv2_1501_19_24
Type: pfam
Location: 28349 - 30289 (-)
Gene ID: HRGMv2_1501_19_25
Type: TC
Location: 30296 - 31978 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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