dbCAN Logo

Cluster: HRGMv2_1500_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1500_31 HRGMv2_1500_31_6 8087 9592 + GH77
CAZyme HRGMv2_1500_31 HRGMv2_1500_31_7 9722 11989 + GT35
TC HRGMv2_1500_31 HRGMv2_1500_31_8 12445 13644 - 3.A.1.1.22
TC HRGMv2_1500_31 HRGMv2_1500_31_9 13713 14552 - 3.A.1.1.45
TC HRGMv2_1500_31 HRGMv2_1500_31_10 14552 15406 - 3.A.1.1.45
TC HRGMv2_1500_31 HRGMv2_1500_31_11 15494 16810 - 3.A.1.1.45
TF HRGMv2_1500_31 HRGMv2_1500_31_12 17117 17836 - GntR
NULL(UNKNOWN) HRGMv2_1500_31 HRGMv2_1500_31_13 17920 18039 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1500_31 HRGMv2_1500_31_14 18061 20511 + 4.A.1.1.8
Gene ID: HRGMv2_1500_31_6
Type: CAZyme
Location: 8087 - 9592 (+)
Gene ID: HRGMv2_1500_31_7
Type: CAZyme
Location: 9722 - 11989 (+)
Gene ID: HRGMv2_1500_31_8
Type: TC
Location: 12445 - 13644 (-)
Gene ID: HRGMv2_1500_31_9
Type: TC
Location: 13713 - 14552 (-)
Gene ID: HRGMv2_1500_31_10
Type: TC
Location: 14552 - 15406 (-)
Gene ID: HRGMv2_1500_31_11
Type: TC
Location: 15494 - 16810 (-)
Gene ID: HRGMv2_1500_31_12
Type: TF
Location: 17117 - 17836 (-)
Gene ID: HRGMv2_1500_31_13
Type:
Location: 17920 - 18039 (-)
Gene ID: HRGMv2_1500_31_14
Type: TC
Location: 18061 - 20511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List