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Cluster: HRGMv2_1500_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1500_19 HRGMv2_1500_19_10 13635 15317 + 2.A.66.4.4
pfam HRGMv2_1500_19 HRGMv2_1500_19_11 15324 17264 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1500_19 HRGMv2_1500_19_12 17630 19243 + 3.A.1.5.27
TC HRGMv2_1500_19 HRGMv2_1500_19_13 19401 20357 + 3.A.1.5.38
TC HRGMv2_1500_19 HRGMv2_1500_19_14 20361 22376 + 3.A.1.5.25
TC HRGMv2_1500_19 HRGMv2_1500_19_15 22377 23204 + 3.A.1.5.27
CAZyme HRGMv2_1500_19 HRGMv2_1500_19_16 23336 24262 + CE7
Gene ID: HRGMv2_1500_19_10
Type: TC
Location: 13635 - 15317 (+)
Gene ID: HRGMv2_1500_19_11
Type: pfam
Location: 15324 - 17264 (+)
Gene ID: HRGMv2_1500_19_12
Type: TC
Location: 17630 - 19243 (+)
Gene ID: HRGMv2_1500_19_13
Type: TC
Location: 19401 - 20357 (+)
Gene ID: HRGMv2_1500_19_14
Type: TC
Location: 20361 - 22376 (+)
Gene ID: HRGMv2_1500_19_15
Type: TC
Location: 22377 - 23204 (+)
Gene ID: HRGMv2_1500_19_16
Type: CAZyme
Location: 23336 - 24262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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