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Cluster: HRGMv2_1499_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1499_15 HRGMv2_1499_15_6 3813 6152 - 3.A.3.5.15
STP HRGMv2_1499_15 HRGMv2_1499_15_7 6625 8709 - Pkinase
STP HRGMv2_1499_15 HRGMv2_1499_15_8 8879 9841 - FHA
TC HRGMv2_1499_15 HRGMv2_1499_15_9 10517 12766 + 1.I.1.1.3
TC HRGMv2_1499_15 HRGMv2_1499_15_10 13131 13643 + 4.A.1.2.5
pfam HRGMv2_1499_15 HRGMv2_1499_15_11 13650 14516 + PRD | PRD | CAT_RBD
TC HRGMv2_1499_15 HRGMv2_1499_15_12 14616 16232 + 4.A.1.1.3
CAZyme HRGMv2_1499_15 HRGMv2_1499_15_13 16236 17618 + GH4
STP HRGMv2_1499_15 HRGMv2_1499_15_14 17875 19707 + Pyr_redox_2
TC HRGMv2_1499_15 HRGMv2_1499_15_15 19701 21512 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1499_15 HRGMv2_1499_15_16 21515 22573 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1499_15 HRGMv2_1499_15_17 22577 23953 + 3.A.1.17.10
Gene ID: HRGMv2_1499_15_6
Type: TC
Location: 3813 - 6152 (-)
Gene ID: HRGMv2_1499_15_7
Type: STP
Location: 6625 - 8709 (-)
Gene ID: HRGMv2_1499_15_8
Type: STP
Location: 8879 - 9841 (-)
Gene ID: HRGMv2_1499_15_9
Type: TC
Location: 10517 - 12766 (+)
Gene ID: HRGMv2_1499_15_10
Type: TC
Location: 13131 - 13643 (+)
Gene ID: HRGMv2_1499_15_11
Type: pfam
Location: 13650 - 14516 (+)
Gene ID: HRGMv2_1499_15_12
Type: TC
Location: 14616 - 16232 (+)
Gene ID: HRGMv2_1499_15_13
Type: CAZyme
Location: 16236 - 17618 (+)
Gene ID: HRGMv2_1499_15_14
Type: STP
Location: 17875 - 19707 (+)
Gene ID: HRGMv2_1499_15_15
Type: TC
Location: 19701 - 21512 (+)
Gene ID: HRGMv2_1499_15_16
Type:
Location: 21515 - 22573 (+)
Gene ID: HRGMv2_1499_15_17
Type: TC
Location: 22577 - 23953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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