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Cluster: HRGMv2_1499_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1499_12 HRGMv2_1499_12_12 11080 11964 - CE7
TC HRGMv2_1499_12 HRGMv2_1499_12_13 12138 12965 - 3.A.1.5.27
TC HRGMv2_1499_12 HRGMv2_1499_12_14 12966 14981 - 3.A.1.5.25
TC HRGMv2_1499_12 HRGMv2_1499_12_15 14985 15941 - 3.A.1.5.38
TC HRGMv2_1499_12 HRGMv2_1499_12_16 16099 17712 - 3.A.1.5.27
pfam HRGMv2_1499_12 HRGMv2_1499_12_17 18078 20018 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1499_12 HRGMv2_1499_12_18 20025 21707 - 2.A.66.4.4
Gene ID: HRGMv2_1499_12_12
Type: CAZyme
Location: 11080 - 11964 (-)
Gene ID: HRGMv2_1499_12_13
Type: TC
Location: 12138 - 12965 (-)
Gene ID: HRGMv2_1499_12_14
Type: TC
Location: 12966 - 14981 (-)
Gene ID: HRGMv2_1499_12_15
Type: TC
Location: 14985 - 15941 (-)
Gene ID: HRGMv2_1499_12_16
Type: TC
Location: 16099 - 17712 (-)
Gene ID: HRGMv2_1499_12_17
Type: pfam
Location: 18078 - 20018 (-)
Gene ID: HRGMv2_1499_12_18
Type: TC
Location: 20025 - 21707 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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